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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7016414 chr8:10916285 A/G SGK223 chr8:8175258-8244008:- 0.41 7.96 1.3E-14 Box Plot
THCA rs7016671 chr8:11182455 A/G SGK223 chr8:8175258-8244008:- -0.36 -6.73 4.95E-11 Box Plot
THCA rs7016808 chr8:10323484 C/T SGK223 chr8:8175258-8244008:- -0.43 -6.75 4.34E-11 Box Plot
THCA rs7017567 chr8:10933699 T/A SGK223 chr8:8175258-8244008:- 0.45 8.69 5.93E-17 Box Plot
THCA rs7017827 chr8:30219809 C/T ARMC2 chr6:109169619-109295675:+ 0.36 5.88 7.55E-9 Box Plot
THCA rs7018302 chr8:3254234 A/G CSMD1 chr8:2792875-4852494:- -0.51 -10.75 2.67E-24 Box Plot
THCA rs7020976 chr9:100547972 T/C BMPR1A chr10:88516358-88692595:+ -0.24 -6.18 1.35E-9 Box Plot
THCA rs7020976 chr9:100547972 T/C CLDN2 chrX:106143394-106174091:+ 0.26 6.06 2.81E-9 Box Plot
THCA rs7020976 chr9:100547972 T/C EML5 chr14:89078775-89259096:- 0.3 6.86 2.11E-11 Box Plot
THCA rs7020976 chr9:100547972 T/C EPDR1 chr7:37723446-37991543:+ 0.32 7.11 4.19E-12 Box Plot
THCA rs7020976 chr9:100547972 T/C GGT5 chr22:24615622-24641110:- 0.26 5.94 5.54E-9 Box Plot
THCA rs7020976 chr9:100547972 T/C LRRC42 chr1:54411750-54433841:+ -0.23 -6.05 2.94E-9 Box Plot
THCA rs7020976 chr9:100547972 T/C NKX6-1 chr4:85413140-85419603:- 0.5 8.83 2.07E-17 Box Plot
THCA rs7020976 chr9:100547972 T/C PLCE1 chr10:95790569-96092580:+ 0.27 6.13 1.81E-9 Box Plot
THCA rs7021576 chr9:100540541 C/T CD302 chr2:160625141-160654766:- 0.24 5.98 4.43E-9 Box Plot